Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs2477275 | chr10:26953000 | T/A | 6.82E-5 | 213 | 17.12 | 14.1 | 15.5 | KM Plot |
| KIRP | rs2477278 | chr10:26957485 | A/C | 0.00027 | 210 | 17.2 | 13.95 | 16.47 | KM Plot |
| KIRP | rs2480452 | chr9:131909736 | C/T | 0 | 211 | 15.2 | 18.18 | 4.07 | KM Plot |
| KIRP | rs2481095 | chr1:235695756 | T/C | 8.52E-5 | 213 | 10.08 | 16.47 | 17.17 | KM Plot |
| KIRP | rs2489560 | chr10:26957507 | G/A | 0.00027 | 210 | 17.2 | 13.95 | 16.47 | KM Plot |
| KIRP | rs2489565 | chr10:26954858 | C/G | 5.58E-5 | 212 | 17.12 | 14.1 | 14.53 | KM Plot |
| KIRP | rs2489566 | chr10:26954129 | C/T | 6.82E-5 | 213 | 17.12 | 14.1 | 15.5 | KM Plot |
| KIRP | rs2489567 | chr10:26954022 | G/C | 6.82E-5 | 213 | 17.12 | 14.1 | 15.5 | KM Plot |
| KIRP | rs2489568 | chr10:26952415 | A/G | 6.97E-5 | 212 | 17.2 | 14.47 | 14.53 | KM Plot |
| KIRP | rs2489569 | chr10:26952255 | G/A | 4.66E-5 | 212 | 17.03 | 15.27 | 14.53 | KM Plot |
| KIRP | rs2489570 | chr10:26952075 | A/G | 6.82E-5 | 213 | 17.12 | 14.1 | 15.5 | KM Plot |
| KIRP | rs2489571 | chr10:26951302 | C/T | 6.82E-5 | 213 | 17.12 | 14.1 | 15.5 | KM Plot |
| KIRP | rs2489572 | chr10:26951189 | G/A | 6.82E-5 | 213 | 17.12 | 14.1 | 15.5 | KM Plot |
| KIRP | rs2494551 | chr6:110797563 | A/C | 4.53E-6 | 207 | 8.77 | 13.8 | 17.02 | KM Plot |
| KIRP | rs2494552 | chr6:110797605 | G/A | 7.96E-8 | 208 | 6.7 | 13.17 | 18.47 | KM Plot |